CDS

Accession Number TCMCG057C36282
gbkey CDS
Protein Id XP_018439722.1
Location join(44613069..44613119,44613203..44613425,44613535..44613603,44614169..44614302,44614431..44615693,44615785..44616012,44616082..44616558)
Gene LOC108812070
GeneID 108812070
Organism Raphanus sativus

Protein

Length 814aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018584220.1
Definition PREDICTED: ATP-dependent zinc metalloprotease FTSH 3, mitochondrial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description ATP-dependent zinc metalloprotease FTSH
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko03110        [VIEW IN KEGG]
KEGG_ko ko:K08956        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004176        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009535        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009735        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0055035        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGATGTTCTTCTCCAAGCTCGGTCGCTCCTCCATCTCTCGAACAAGGGGGTTTTTGTACGGTGGTGGTGGTGGTGGTGTGAGATCGGGGAGGCTGATTGCTCCGCCGCCGACGTCGGTGAATCAAGCGGAAGGTGGTGGATTAGGGTTGTTGAGTCGGCACTTTGCTTCGTTAACTGGTAGAAAGGGGCTCGTCGATAATGATTTGATTGGTGTTTTCGCTAATCCAAGACTTCGTCGGTTCTTCTCCGACGAAGCTCCCAAGAAGAAGAATTATGAGAACTACTTTCCGAAAGCTCCAAAGCAAGAACCAAAGAGTGATCAGAAATCTGAATCTAAAGAGGGTTCAGACAAGAACGAAAACGAGAACCTGGGAGATATGTTTGCCAATCGATTCCAGAATTTGCTAATTCCACTTCTGGCTCTTGCTATTTTCCTTTCTTCTTTCTCCTTTGGCTCTGGAGACCAGCAACAGATTAGTTTCCAGGAGTTCAAAAACAAGCTTCTCGAGCCTGGTCTAGTCGACCACATAGACGTCTCAAACAAATCAGTAGCCAAAGTCTACGTGAGAAGCACACCGAGAGACCAACAAACAACAACACAAGACGTTGTTATCCAAGGAAACGGCAACGCCCAAGGCATCCCTGTCAAGAGAACCGGTGGCCAGTACAAGTACTACTTCAGCATCGGTAGCGTCGACTCTTTCGAGGAGAAACTCGAAGAAGCTCAAGAAGCCTTAGGCATCGATCCTCACCAGTTCGTTCCCGTCACGTACACCACCGAAATGGTCTGGTTCCAAGAGTTTCTCCGGTTCGCACCGACTCTACTCCTCTTGGGCACTCTCGTCTACGGAGCCAGGAGGATGCAAGGCGGGTTAGGAGGTCTAGGAGGAACCGGAGGAAAGAACGGCCGTGGAATCTTCAACATAGGCAAAGCCACGATAACGAGAGCTGACAAAAACTCCAAGAACAAGATTTACTTCAAGGACGTGGCTGGATGCGACGAGGCTAAACAAGAGATCATGGAGTTTGTGCATTTCCTCAAAAACCCTAAAAAATACGAAGACTTGGGTGCCAAGATACCTAAAGGAGCTCTCTTAGTCGGTCCTCCCGGAACGGGAAAGACCCTTTTAGCCAAAGCTACAGCTGGAGAATCAGGCGTGCCGTTTCTCTCCATCTCCGGTTCAGACTTCATGGAGATGTTCGTCGGTGTTGGACCTTCCAGGGTGAGAAACCTGTTCCAAGAAGCTAGACAAGCTGCGCCGAGCATCATCTTTATAGACGAGATCGACGCCATCGGTAGAGCGAGAGGACGTGGAGGGTTAGGCGGTAACGACGAGCGCGAGAGCACTTTGAACCAGCTGCTCGTTGAGATGGATGGGTTTGGTACAACTGCTGGAGTTGTGGTTCTCGCTGGGACCAACAGACCGGATATTCTTGATAAAGCTTTGTTACGTCCCGGCCGGTTCGATCGTCAGATAACCATTGATAAACCGGATATCAAGGGGCGTGATCAGATATTCCAGATTTACTTAAAGAAGATCAAATTAGATCACGAGCCTTCTTACTACTCTCAGAGACTCGCTGCTCTCACTCCTGGTTTCGCCGGTGCTGACATTGCTAATGTATGTAACGAAGCGGCTCTTATCGCCGCTAGACACGAAGGAGCTACTGTCACAATGGCACACTTTGAATCTGCTATTGATCGTGTCATTGGTGGTCTTGAGAAGAAGAACAGAGTGATAAGTAAGCTGGAGCGTCGTACAGTTGCGTATCATGAATCTGGTCACGCCGTTGCTGGTTGGTTCCTGGAACACGCGGAGCCATTGCTGAAGGTGACCATCGTGCCACGTGGAACAGCTGCGCTCGGTTTTGCTCAATACGTTCCTAATGAAAACCTTCTCATGACCAAAGAACAGCTCTTTGACATGACTTGCATGACTCTAGGTGGCCGTGCAGCCGAGCAGGTATTGATAGGGAAGATCTCAACGGGTGCACAAAACGATCTAGAGAAAGTTACAAAGATGACATACGCGCAAGTAGCTGTCTACGGTTTCAGCGACAAGGTCGGACTCCTCTCGTTTCCGCCGAGGGATGATGGATACGACTTCAACAAACCGTACAGCAACAAGACCGGCGCGATCATAGACGAGGAAGTGAGGGAATGGGTGGGGAAAGCTTATGAGAAGACGGTGGAGCTGATAGAGACGCACAAGGAGAAAGTGGCTGAGATCGCCGAGCTTTTGCTGGAGAAGGAAGTGCTGCATCAGGATGATCTTTTGAAAGTTTTGGGTGAGCGTCCGTTTAAACCGGCCGAGGTTACTAACTATGACCGGTTCAAGTCCGGGTTTGAAGAGAGTGAGAAGGAGGAGTCCTCCACAACGACGCCTGTGGTGGATGAAGGAGCTCCCCCGCCGCTTGAGCCTCAGGTGGTTCCTACGTAG
Protein:  
MTMFFSKLGRSSISRTRGFLYGGGGGGVRSGRLIAPPPTSVNQAEGGGLGLLSRHFASLTGRKGLVDNDLIGVFANPRLRRFFSDEAPKKKNYENYFPKAPKQEPKSDQKSESKEGSDKNENENLGDMFANRFQNLLIPLLALAIFLSSFSFGSGDQQQISFQEFKNKLLEPGLVDHIDVSNKSVAKVYVRSTPRDQQTTTQDVVIQGNGNAQGIPVKRTGGQYKYYFSIGSVDSFEEKLEEAQEALGIDPHQFVPVTYTTEMVWFQEFLRFAPTLLLLGTLVYGARRMQGGLGGLGGTGGKNGRGIFNIGKATITRADKNSKNKIYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDFNKPYSNKTGAIIDEEVREWVGKAYEKTVELIETHKEKVAEIAELLLEKEVLHQDDLLKVLGERPFKPAEVTNYDRFKSGFEESEKEESSTTTPVVDEGAPPPLEPQVVPT